Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930516.1_cds_XP_016477542.1_69267
CDS Infomation

[gene=LOC107799003] [db_xref=GeneID:107799003] [protein=chaperone protein ClpB1-like isoform X3] [protein_id=XP_016477542.1] [location=join(47154..47922,48044..48427,49018..49199,49302..49924,50009..50288,50420..50617,50702..50995)] [gbkey=CDS]
Sequence

ATGAATCCTGAAAAATTCACCCACAAGACTAACGAGGCCCTTGCTGGGGCACTCGAGCTA
GCACTATCCGCAGGGCATGCTCAATTTACGCCTCTGCATATGGCTGTGGCCTTAATATCT
GATCACAATGGTATTTTTCGACAAGCGATTGTCAATGCTGGTGGGAATGAAGAAGTAGCT
AATTCAGTGGAGCGGGTATTGAATCAAGCGATGAAGAAGCTACCTTCTCAAACACCGGCT
CCTGACGAAATCCCACCTAGCACTTCCCTTATCAAGGTGTTACGCCGAGCACAATCGTCG
CAGAAGTCTCGTGGTGACAGCCATTTAGCAGTGGATCAGTTGATTTTAGGACTGCTAGAA
GACTCCCAAATTGGAGATCTTTTGAAAGAAGCTGGAGTGAGTGCATCAAGAGTGAAATCA
GAGGTAGAGAAACTTAGAGGAAAGGAAGGAAGAAAAGTCGAAAGTGCTTCAGGGGACACC
ACATTCCAAGCACTCAACACTTATGGCCGTGATCTTGTGGAACAAGCAGGAAAGCTTGAT
CCCGTGATTGGTAGGGATGAAGAAATTAGAAGAGTCGTTCGGATTTTATCAAGGAGGACT
AAGAACAACCCGGTTCTTATTGGAGAGCCCGGTGTGGGTAAAACAGCAGTTGTTGAAGGG
CTAGCACAGAGGATTGTACGTGGTGATGTTCCAAGTAATTTAGCTGATGTTAGGCTTATA
GCATTGGATATGGGAGCGCTAGTTGCTGGAGCTAAGTACAGAGGTGAATTTGAAGAGAGG
CTGAAGGCTGTGCTGAAAGAAGTTGAAGAAGCGGAAGGGAAAGTAATACTTTTCATTGAC
GAGATACATTTAGTCCTCGGTGCTGGTCGGACAGAAGGGTCTATGGATGCTGCTAATCTG
TTTAAGCCAATGCTAGCCAGAGGTCAATTACGGTGCATTGGTGCAACTACACTCGAGGAG
TACAGGAAGTATGTTGAGAAGGATGCTGCATTTGAGAGGCGTTTCCAGCAGGTGTATGTT
GCTGAGCCTAGTGTTGCTGACACTATTAGTATTCTCCGTGGGTTGAAGGAGAGGTATGAA
GGGCATCATGGTGTCAAAATTCAGGACAGAGCTCTTGTAGTGGCTGCCCAGCTCTCATCT
CGGTACATTACAGGTCGACATCTGCCAGATAAGGCTATTGACCTAGTTGATGAAGCTTGT
GCAAATGTTAGAGTTCAGCTTGATAGTCAACCTGAGGAAATTGACAATCTTGAGAGGAAG
AGAATTCAGCTAGAGGTTGAACTTCACGCTCTCGAGAAGGAAAAAGACAAAGCTAGCAAA
GCACGTCTCATAGAAGTGAGGAAAGAACTTGATGATTTGAGAGACAAACTCCAACCTTTG
ATGATGAGGTACAAAAAAGAGAAGGAAAGGATAGATGAGCTGCGCAGGCTCAAGCAAAAG
CGCGATGAGCTCATCTATGCTTTACAAGAAGCTGAAAGGAGATATGATCTGGCGAGGGCA
GCAGATCTGAGATATGGGGCAATTCAAGAAGTGGAAACTGCAATAGCAAATCTTGAGAGT
ACCTCAGCTGAGAGTACAATGCTAACAGAGACTGTGGGTCCTGATCAGATTGCGGAAGTT
GTGAGTCGTTGGACTGGTATTCCGGTCTCAAGGCTTGGTCAGAATGAGAAAGAGAAACTG
ATTGGTCTTGGCGATAGATTGCACCAAAGAGTGGTCGGGCAAGATCATGCAGTTAGAGCT
GTTGCTGAAGCCGTGTTAAGGTCCAGAGCTGGTTTAGGAAGGCCACAGCAACCAACTGGT
TCATTCCTTTTCTTGGGGCCAACTGGTGTTGGAAAGACAGAGCTCGCTAAAGCTCTTGCA
GAGCAGCTCTTTGATGATGATAAACTGATGATCAGAATAGACATGTCCGAGTACATGGAA
CAACACTCTGTTTCCCGGCTGATTGGTGCTCCACCAGGTTATGTTGGGCATGATGAGGGA
GGACAACTTACTGAAGCTGTTAGGAGGCGGCCTTACAGTGTTGTGCTATTTGATGAAGTT
GAGAAAGCCCATCCTGCAGTGTTTAATACATTGCTTCAAGTTCTGGATGATGGAAGGTTA
ACAGATGGTCAAGGCCGCACAGTTGATTTCACCAACTCCGTGATTATTATGACTTCAAAC
TTGGGAGCAGAGTATCTGTTGTCTGGATTAATGGGCAAATGTACCATGGAGACAGCTCGT
GAAATGGTCATGCAGGAGGTGCGAAAGCAGTTTAAGCCCGAGCTGCTGAATCGGCTGGAT
GAGATTGTTGTGTTTGATCCTCTGTCCCACAAGCAGTTGAGGCAAGTATGCCGCTACCAG
ATGAAGGACGTTGCACTACGGCTGGCTGAGAGGGGTATTGCATTGGGCGTTACTGAGGCA
GCTCTAGATGTCATACTCACAGAGAGTTATGACCCGGTTTATGGTGCAAGACCTATTAGG
AGATGGTTGGAGAGGAAGGTGGTGACCGAGCTATCCAAGATGCTCGTGAAGGAGGAGATT
GATGAGAACTCAACGGTTTACATAGATGCTGGGGTCAGCGGGAAAGATCTAACCTACAGG
GTGGAGAAGAATGGAGGGCTTGTGAATGCTGCCACCGGGCAAAAATCTGATATATTGATT
CAGCTTCCTAATGGTCCCAGGAGTGATGCTGTCCAAGCAGTCAAGAAGATGAGGATTGAA
GAAATTGAAGATGACGAAATGGAAGATTGA

Peptide Sequence

PEP ID

XP_016477542.1
PEP Infomation

PREDICTED: chaperone protein ClpB1-like isoform X3 [Nicotiana tabacum]
Sequence

MNPEKFTHKTNEALAGALELALSAGHAQFTPLHMAVALISDHNGIFRQAIVNAGGNEEVA
NSVERVLNQAMKKLPSQTPAPDEIPPSTSLIKVLRRAQSSQKSRGDSHLAVDQLILGLLE
DSQIGDLLKEAGVSASRVKSEVEKLRGKEGRKVESASGDTTFQALNTYGRDLVEQAGKLD
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI
ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKERYE
GHHGVKIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
RIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLMMRYKKEKERIDELRRLKQK
RDELIYALQEAERRYDLARAADLRYGAIQEVETAIANLESTSAESTMLTETVGPDQIAEV
VSRWTGIPVSRLGQNEKEKLIGLGDRLHQRVVGQDHAVRAVAEAVLRSRAGLGRPQQPTG
SFLFLGPTGVGKTELAKALAEQLFDDDKLMIRIDMSEYMEQHSVSRLIGAPPGYVGHDEG
GQLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQVLDDGRLTDGQGRTVDFTNSVIIMTSN
LGAEYLLSGLMGKCTMETAREMVMQEVRKQFKPELLNRLDEIVVFDPLSHKQLRQVCRYQ
MKDVALRLAERGIALGVTEAALDVILTESYDPVYGARPIRRWLERKVVTELSKMLVKEEI
DENSTVYIDAGVSGKDLTYRVEKNGGLVNAATGQKSDILIQLPNGPRSDAVQAVKKMRIE
EIEDDEMED

Transcript Sequence

Gene sequence data has not been registered.